Nikon N-STORM System
The Nikon N-STORM system is one of the crown jewels among Nikon’s microscope systems. Stochastic Optical Reconstruction Microscopy (STORM) has been a revolutionary technique that achieves super-resolution by temporally separating the registration of individual fluorophores. The most used case is the application of photo-switchable dyes that have a reversible dark state in the appropriate medium. A powerful laser is used to drive almost all of these molecules into a dark state. Periodically a few molecules return to the ground state and due to continuous illumination are excited again and again until driven into dark state again. Recording these spatially separated blinking events and fitting the centroid of the Point Spread Function (PSF) results in a point list. This point list will finally outline the investigated structure and enables the system to reach about tenfold increase in lateral/axial resolution (20-60nm laterally and 50-100nm axially).
The microscope is a TIRF microscope equipped with a series of lenses that focus the laser onto the specimen to further increase the local light intensity 4x or 8X. The microscope is equipped with Nikon’s cutting edge Perfect Focus System that compensates for Z-drift. The unsurpassed stability achieved thanks to the PSF system is prerequisite for STORM imaging. The microscope laser board contains 4 lines: 405,488,561 and 642nm (out of which the 642 and 561 are high power lasers) and a series of high quality filter cubes (HQ Blue, HQ Green, HQ Red, Far-red STORM and Red/Far-Red Dual STORM cube). The microscope is also fitted with a C2 confocal scan head that allows correlative STORM-Confocal imaging. 4x, 10x, 20x Plan Fluor and a 100x TIRF Plan Apo objective is the choice of lenses.

Overview
Component | Type | Description |
---|---|---|
Laser Lines | 405 nm 488 nm 561 nm 642 nm |
50 mW* 200 mW* 300 mW* 330 mW* |
Objectives | 10x 20x 100x Oil |
Plan Fluor NA=0.13 WD=17mm FOV=3215.36um S Plan Fluor NA=0.45 WD=8.2–6.9mm FOV=1290.4um Apo TIRF NA=1.49 WD=0.12mm FOV= ? um |
Microscope Base | Nikon Ti Eclipse | Inverted, fully motorized (stage, filterwheel, turret) |
Stage Adapter | Ti-SH-U | Universal Holder (any microscope slide,35 mm dishes) |
Acquisition Software | NIS Elements AR | Version: 4.51.00 (Build 1143) |
Vibration Isolation Table | Supertech STable | Active pneumatic table |
STORM/TIRF System | ||
TIRF Illuminator | Ti-TIRF-E | variable TIRF angle (1 manuanl/1 motorized direction), 2x/4x focusing lens |
Filter Cubes | HQ Blue** HQ Green** HQ Red** Dual STORM** Far-red STORM** |
EX:370-410nm DM:416nm EM:429-474nm EX:- DM:496nm EM:502-547nm EX:554-568nm DM:575nm EM:557-661nm EX:- DM:500-629/650-757nm EM:500-624/658-755nm EX:- DM:660nm EM:670-760nm |
Camera | Andor iXonEM Ultra 897 | Back illuminated EMCCD 95% Quantum efficiency 512 x 512 pixels (16um pixels) Single photon sensitivity Redout speed:30,10,5 & 1 MHz |
Confocal System | ||
Scanning Head | Nikon C2+ | High precision galvano scanners |
Detector Unit: | C2-DU3 | 3 Standard PMTs |
1st Dichroic Mirror | 405/488/561/640 | Nikon |
Emission Filters | DAPI/CY5(dual) 525/50 nm 594/40 nm |
Semrock EMD/CY5 Custom 239415 Nikon Nikon |
*Nominal output power at laser head
**Custom Filters with Chroma and/or semrock filters
Details
Laser Lines:
The Nikon LU4A laser box contains four lasers as follows:
Wavelength | Type | Manufacturer | Model | Power |
---|---|---|---|---|
408nm* | Solid State | Melles Griot | 56RCS S2780 | 50mW |
488nm* | Solid State | Coherent | Saphire | 200mW |
561nm* | Solid State | Coherent | Saphire | 300mW |
647nm* | Solid State | MPB Communication | VFL-P Series 647nm | 330mW |
*Nominal output power at laser head
Part List:
Component | Type | ID | Description |
---|---|---|---|
Microscope Base | Ti-E Eclipse Ti-PS100W Ti-HUBC/A |
S/N:532257 S/N:2013094 S/N:551490 |
Inverted, fully motorized Controller Base Hub |
xy-Stage | Ti-S-ER Ti-S-CON Ti-S-EJOY |
S/N:661168 S/N:561693 S/N:557697 |
Motorized with encoder Controller Joy-stick |
Stage Adapter | Ti-SH-U | - | Universal Holder (slides,35 mm dishes) |
Piezo Stage | Mad City Labs Nano MCL nano Drive |
S/N:NIK-S1649 S/N:NIK-C1649 |
Piezoelectric stage Controller |
Nosepiece | Ti-ND6-PSF Ti-PFS-CON |
- S/N:594808 |
Motorized nosepiece PSF Controller |
Lasers | |||
Laser Board: | LU4A LU-LR |
S/N:60193 S/N:54488 |
4 laser lines Laser power supply |
408 Laser | Melles Griot 56RCS S2780 | S/N:80466 | 50 mW |
488 Laser | 1. Coherent Saphire 2. Saphire LP USB CDRH |
1. P/N:488-200 CW 1137970 S/N:LDP.1137970.508465 2. P/N:1170412 S/N:LDP1170412.C00464 |
1. 200mW 2. Controller |
561 Laser | 1. Coherent Saphire 2. Saphire LP USB CDRH |
1. P/N:561-300 CW 1255312 S/N:LDP.1255312.175845 2. P/N:1170412 S/N:LDP1170412.C00921 |
1. 300mW 2. Controller |
647 Laser | 1. MPB Communication 2RU-VFL-P-300-647-B1 2. 2RU-VFL-P-300-647-B1 |
1. P/N:MPB-F-04306-113 S/N:1101C037-04 2. S/N:2RU-1123-1725 |
1. 330mW 2. Controller |
Confocal System | |||
Scanning Head | C2+ C2-SH |
S/N:32045 S/N:32045 |
HP galvano scanners Controller |
Detector Unit: | C2-DU3 | S/N:14120 | 3 Standard PMTs |
Widefield System | |||
TIRF Illumination | Ti-N2-SS | S/N:593211 - |
Illumination Unit STORM Lens assembly |
Diascopic Illumination | D-LH/LC Ti-DH Ti-CT-E |
S/N:955374 S/N:602303 - |
100W Halogen Lamp Illumination Pillar Motorized Condensor |
Episcopic Illumination | Intensilight C-HGFIE Controller Ti-FLC-E |
S/N:870068 S/N:620194 - |
1. Enhanced Metal Arc (EmArc) Lamp,Liquid lightguide 2. Fluorescent illumination unit 3. Motorized filter cube turret |
Camera | Andor iXonEM Ultra 897 | P/N:DU-897D-COO-#BV S/N:X-5209 | EMCCD for STORM |